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The Batch Genome Variation Server queries a local database hosted by the SeattleSNPs Program for Genomic Applications (PGA).
The objective of this database is to provide a simple tool for rapid access to human genotype data found
in dbSNP. The current dbSNP build is build 128 (October 2007).
The variation locations are mapped to the human genome reference sequence of March 2006 (NCBI build 36, UCSC hg18).
Information on the database content and on the details of any calculations can be found in the documentation pages of
the GVS site.
Batch GVS allows you to perform large automated searches by submitting a text file with a list of genes, chromosome regions, or rs IDs.
The database search is performed at low priority (as such requests can be time-consuming).
Once the search and any requested calculations are complete, an e-mail is sent to you with a link for downloading a file.
This site is supported by PGA grants HL66682 and HL66642 from the National Heart, Lung, and Blood Institute (NHLBI). We thank Paul Scheet,
Matthew Stephens, and University of Washington TechTransfer for permission to run fastPHASE on this site.
Please see the terms of service.
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National Heart, Lung, and Blood Institute
Programs for Genomic Applications